[3] When the MacDiarmid Institute for Advanced Materials and Nanotechnology was formed in 2002, he was appointed Deputy Director under Professor Paul Callaghan.[4] Blaikie stepped down from the MacDiarmid Institute half way through 2011 when he received his appointment as Deputy Vice-Chancellor (Research and Enterprise) at the University of Otago.[5] Blaikie received the T. K. Sidey Medal in 2001, set up by the Royal Society of New Zealand as an award for outstanding scientific research.[8] In 2013, Blaikie received the Hector Memorial Medal from the Royal Society "for his fundamental and wide-ranging contributions to the field of nano-optics, showing that light can be manipulated at scales much smaller than its wavelength and providing a world-first demonstration of a controversial superlens system using subwavelength techniques."[9][10][11] The national ceremony for a range of Royal Society awards were held in the Dunedin Town Hall on 27 November 2013.